Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm11667-201ENSMUST00000119828 486 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm15197-201ENSMUST00000120526 478 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm25343-201ENSMUST00000157460 107 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm24398-201ENSMUST00000157870 109 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Snord55-201ENSMUST00000174939 79 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm3508-201ENSMUST00000186012 792 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm17877-201ENSMUST00000192578 814 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm43380-201ENSMUST00000200421 220 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm39288-201ENSMUST00000210554 446 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Id2-203ENSMUST00000222667 958 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm23680-201ENSMUST00000083162 164 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3aQ9JKX8 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3aQ9JKX8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm12516-201ENSMUST00000120819 385 ntBASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Gm28032-201ENSMUST00000184104 96 ntBASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3aQ9JKX8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms