Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.71□□□□□ -0.53
Rnf135Q9CWS1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf135Q9CWS1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm23085-201ENSMUST00000157849 293 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm8194-201ENSMUST00000159783 859 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm5733-201ENSMUST00000190232 939 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf135Q9CWS1 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Gm15617-201ENSMUST00000118973 771 ntBASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf135Q9CWS1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms