Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm14058-201ENSMUST00000116082 735 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm13035-201ENSMUST00000117496 342 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm8199-201ENSMUST00000121323 823 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm23085-201ENSMUST00000157849 293 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm18734-201ENSMUST00000172937 808 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm4482-201ENSMUST00000200876 742 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 AC154634.3-201ENSMUST00000224589 736 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.92□□□□□ -0.66
Rnf111Q99ML9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf111Q99ML9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 AA474408-201ENSMUST00000098110 3339 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm12463-201ENSMUST00000118271 849 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm13461-201ENSMUST00000120980 662 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm11450-201ENSMUST00000121144 333 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm26047-201ENSMUST00000157308 113 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm3329-201ENSMUST00000159873 556 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm5733-201ENSMUST00000190232 939 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm26047-202ENSMUST00000198840 115 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm5369-201ENSMUST00000217499 588 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Nsd1-205ENSMUST00000224693 852 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf111Q99ML9 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf111Q99ML9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms