Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm25076-201ENSMUST00000104098 132 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm4294-201ENSMUST00000105169 614 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm8111-201ENSMUST00000117659 987 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm16219-201ENSMUST00000120096 274 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm14585-201ENSMUST00000120713 634 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Casc4Q6P2L7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm14263-201ENSMUST00000117955 746 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm10731-201ENSMUST00000181171 448 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm45550-201ENSMUST00000209380 946 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm45770-201ENSMUST00000212105 616 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Casc4Q6P2L7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Casc4Q6P2L7 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms