Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm43378-201ENSMUST00000199336 582 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm18711-201ENSMUST00000199341 750 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm19994-201ENSMUST00000217086 586 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Gzmn-202ENSMUST00000225535 989 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Foxc1Q61572 AC123658.1-201ENSMUST00000228364 867 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm5780-201ENSMUST00000217774 1834 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Foxc1Q61572 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm37057-201ENSMUST00000192624 1916 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.72□□□□□ -1.01
Foxc1Q61572 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Foxc1Q61572 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Foxc1Q61572 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Foxc1Q61572 Gm2420-201ENSMUST00000119864 2149 ntBASIC8.71□□□□□ -1.01
Foxc1Q61572 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Foxc1Q61572 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm12566-201ENSMUST00000121479 359 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm11817-201ENSMUST00000155578 685 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm22552-201ENSMUST00000157796 337 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm4034-201ENSMUST00000187674 480 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm44124-201ENSMUST00000204159 472 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Gm18597-201ENSMUST00000209519 694 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC8.71□□□□□ -1.02
Foxc1Q61572 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC8.71□□□□□ -1.02
Foxc1Q61572 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Foxc1Q61572 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms