Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm15528-201ENSMUST00000117821 864 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm4726-201ENSMUST00000135604 736 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm6019-201ENSMUST00000148369 736 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm20426-201ENSMUST00000173657 440 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm10731-201ENSMUST00000181171 448 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm43186-201ENSMUST00000198130 824 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.69□□□□□ -0.54
Tcf4Q60722 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tcf4Q60722 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tcf4Q60722 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gm11949-201ENSMUST00000117640 372 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gm43916-201ENSMUST00000205062 967 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.68□□□□□ -0.54
Tcf4Q60722 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.68□□□□□ -0.54
Tcf4Q60722 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tcf4Q60722 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tcf4Q60722 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tcf4Q60722 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.67□□□□□ -0.54
Tcf4Q60722 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tcf4Q60722 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tcf4Q60722 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms