Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm28205-201ENSMUST00000189177 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm29032-201ENSMUST00000189797 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm28695-201ENSMUST00000190300 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm37448-201ENSMUST00000192795 697 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 AA914427-201ENSMUST00000193194 1166 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm6334-201ENSMUST00000207083 228 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm45113-201ENSMUST00000207518 165 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm270-201ENSMUST00000223010 976 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.73□□□□□ -0.69
Nr1h4Q60641 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.73□□□□□ -0.69
Nr1h4Q60641 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nr1h4Q60641 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm13392-201ENSMUST00000117708 150 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm11573-201ENSMUST00000119956 394 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm38317-201ENSMUST00000195564 343 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm18038-201ENSMUST00000197900 485 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm17812-201ENSMUST00000204935 318 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm45865-201ENSMUST00000211815 945 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.72□□□□□ -0.69
Nr1h4Q60641 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nr1h4Q60641 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.71□□□□□ -0.69
Nr1h4Q60641 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm11663-201ENSMUST00000117888 290 ntBASIC10.71□□□□□ -0.69
Nr1h4Q60641 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm8815-201ENSMUST00000173809 620 ntBASIC10.71□□□□□ -0.69
Nr1h4Q60641 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nr1h4Q60641 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms