Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm8342-201ENSMUST00000209839 757 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm2517-201ENSMUST00000215651 348 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm8737-201ENSMUST00000122208 642 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Mir3102-201ENSMUST00000175555 104 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm17831-201ENSMUST00000205579 900 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.94□□□□□ -0.5
Syne3Q4FZC9 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm9211-201ENSMUST00000182882 975 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Gm8959-201ENSMUST00000213150 571 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Syne3Q4FZC9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms