Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Gm27989-201ENSMUST00000184721 107 ntBASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Cks1brtQ3UNC9 Gm37348-201ENSMUST00000193104 1789 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm12502-201ENSMUST00000120197 444 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Mir7654-201ENSMUST00000185082 70 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm37497-201ENSMUST00000195830 798 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm42612-201ENSMUST00000197986 623 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm43170-201ENSMUST00000199827 612 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm2824-203ENSMUST00000226189 1228 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm38910-201ENSMUST00000204630 2448 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Pnpla1-202ENSMUST00000114737 4483 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Pnpla1-201ENSMUST00000056866 4483 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Gm37759-201ENSMUST00000194155 3246 ntBASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Cks1brtQ3UNC9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Cks1brtQ3UNC9 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Cks1brtQ3UNC9 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms