Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm12904-201ENSMUST00000117451 1399 ntBASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm13217-201ENSMUST00000120466 953 ntBASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm43965-201ENSMUST00000203779 789 ntBASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Gm42402-201ENSMUST00000208341 1054 ntBASIC10.32□□□□□ -0.76
Spg11Q3UHA3 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Spg11Q3UHA3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm11960-201ENSMUST00000122068 925 ntBASIC10.31□□□□□ -0.76
Spg11Q3UHA3 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Spg11Q3UHA3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gm8796-201ENSMUST00000219122 936 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 AC166061.1-201ENSMUST00000225163 1138 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gnpnat1-202ENSMUST00000226276 710 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Spg11Q3UHA3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Spg11Q3UHA3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms