Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col5a2Q3U962 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.21□□□□□ -0.29
Col5a2Q3U962 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a2Q3U962 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Gm18164-201ENSMUST00000213769 927 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Gm18166-201ENSMUST00000215557 927 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a2Q3U962 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Col5a2Q3U962 Btrc-209ENSMUST00000224478 2194 ntBASIC13.21□□□□□ -0.3
Col5a2Q3U962 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm8525-201ENSMUST00000189674 861 ntBASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm9619-201ENSMUST00000211587 762 ntBASIC13.2□□□□□ -0.3
Col5a2Q3U962 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm25514-201ENSMUST00000083860 135 ntBASIC13.2□□□□□ -0.3
Col5a2Q3U962 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a2Q3U962 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.2□□□□□ -0.3
Col5a2Q3U962 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a2Q3U962 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col5a2Q3U962 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms