Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm7857-201ENSMUST00000117957 358 ntBASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm28686-201ENSMUST00000187404 609 ntBASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.91□□□□□ -0.5
Trim43aQ3TL54 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.91□□□□□ -0.5
Trim43aQ3TL54 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm15617-201ENSMUST00000118973 771 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm12266-201ENSMUST00000120311 962 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm29615-201ENSMUST00000185371 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28224-201ENSMUST00000186078 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm29001-201ENSMUST00000186177 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28292-201ENSMUST00000186593 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28101-201ENSMUST00000187608 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm29076-201ENSMUST00000187689 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28302-201ENSMUST00000187931 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28646-201ENSMUST00000188220 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28205-201ENSMUST00000189177 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm29032-201ENSMUST00000189797 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm28695-201ENSMUST00000190300 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm37448-201ENSMUST00000192795 697 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm38151-201ENSMUST00000195085 289 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm17812-201ENSMUST00000204935 318 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm8913-201ENSMUST00000209491 641 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43aQ3TL54 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43aQ3TL54 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43aQ3TL54 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms