Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smn1P97801 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Smn1P97801 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.6□□□□□ -0.87
Smn1P97801 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.6□□□□□ -0.87
Smn1P97801 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.6□□□□□ -0.87
Smn1P97801 Gm5616-201ENSMUST00000165252 384 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Gm8741-201ENSMUST00000174736 384 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Gm27627-201ENSMUST00000183644 150 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.6□□□□□ -0.87
Smn1P97801 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Smn1P97801 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.6□□□□□ -0.87
Smn1P97801 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smn1P97801 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.59□□□□□ -0.87
Smn1P97801 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Gm5745-201ENSMUST00000183748 313 ntBASIC9.59□□□□□ -0.87
Smn1P97801 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.59□□□□□ -0.87
Smn1P97801 Gm17812-201ENSMUST00000204935 318 ntBASIC9.59□□□□□ -0.87
Smn1P97801 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smn1P97801 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Smn1P97801 Gm26448-201ENSMUST00000082446 203 ntBASIC9.59□□□□□ -0.87
Smn1P97801 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.59□□□□□ -0.87
Smn1P97801 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.59□□□□□ -0.87
Smn1P97801 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smn1P97801 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Smn1P97801 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smn1P97801 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.58□□□□□ -0.88
Smn1P97801 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smn1P97801 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smn1P97801 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms