Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.42□□□□□ -0.74
Cacna1aP97445 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Mir705-201ENSMUST00000102058 82 ntBASIC10.42□□□□□ -0.74
Cacna1aP97445 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.42□□□□□ -0.74
Cacna1aP97445 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cacna1aP97445 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.42□□□□□ -0.74
Cacna1aP97445 Mir598-201ENSMUST00000102094 79 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm23745-201ENSMUST00000104230 125 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm8302-201ENSMUST00000119217 852 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm26174-201ENSMUST00000158415 219 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm43966-201ENSMUST00000203301 612 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm8255-201ENSMUST00000218693 305 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Snord23-201ENSMUST00000116828 109 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm11544-201ENSMUST00000120215 382 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm13284-201ENSMUST00000121020 547 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.41□□□□□ -0.74
Cacna1aP97445 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.41□□□□□ -0.74
Cacna1aP97445 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.41□□□□□ -0.74
Cacna1aP97445 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cacna1aP97445 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cacna1aP97445 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms