Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm5244-201ENSMUST00000164001 339 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC18.06■□□□□ 0.48
Cux2P70298 Mipep-ps-201ENSMUST00000177439 291 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm22616-201ENSMUST00000179783 100 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm29487-201ENSMUST00000190146 256 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm42617-201ENSMUST00000197640 1229 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm9273-201ENSMUST00000200606 715 ntBASIC18.06■□□□□ 0.48
Cux2P70298 AC163646.3-201ENSMUST00000228879 772 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cux2P70298 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cux2P70298 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cux2P70298 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Cux2P70298 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm8754-201ENSMUST00000118391 520 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm14153-201ENSMUST00000119923 1139 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC18.06■□□□□ 0.48
Cux2P70298 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Gm28179-201ENSMUST00000188365 613 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cux2P70298 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC18.06■□□□□ 0.48
Cux2P70298 Gm6008-201ENSMUST00000206542 874 ntBASIC18.06■□□□□ 0.48
Cux2P70298 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cux2P70298 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cux2P70298 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cux2P70298 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Gm7790-201ENSMUST00000118716 1310 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Gm4865-201ENSMUST00000196284 1309 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cux2P70298 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Cux2P70298 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC18.05■□□□□ 0.48
Cux2P70298 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC18.05■□□□□ 0.48
Cux2P70298 Gm11544-201ENSMUST00000120215 382 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC18.05■□□□□ 0.48
Cux2P70298 Mir8104-201ENSMUST00000185165 101 ntBASIC18.05■□□□□ 0.48
Cux2P70298 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC18.05■□□□□ 0.48
Cux2P70298 Gm18182-201ENSMUST00000191380 1251 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Saa-ps-201ENSMUST00000211148 320 ntBASIC18.05■□□□□ 0.48
Cux2P70298 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cux2P70298 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cux2P70298 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC18.04■□□□□ 0.48
Cux2P70298 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cux2P70298 Gm11929-201ENSMUST00000118175 945 ntBASIC18.04■□□□□ 0.48
Cux2P70298 n-R5s154-201ENSMUST00000122513 108 ntBASIC18.04■□□□□ 0.48
Cux2P70298 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC18.04■□□□□ 0.48
Cux2P70298 Gm26021-201ENSMUST00000158664 131 ntBASIC18.04■□□□□ 0.48
Cux2P70298 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC18.04■□□□□ 0.48
Cux2P70298 Gm6946-201ENSMUST00000182237 987 ntBASIC18.04■□□□□ 0.48
Cux2P70298 Gm7812-201ENSMUST00000203479 874 ntBASIC18.04■□□□□ 0.48
Cux2P70298 AC132881.1-201ENSMUST00000223780 1062 ntBASIC18.04■□□□□ 0.48
Cux2P70298 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cux2P70298 Gm42651-201ENSMUST00000199851 1339 ntBASIC18.04■□□□□ 0.48
Cux2P70298 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cux2P70298 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cux2P70298 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC18.04■□□□□ 0.48
Cux2P70298 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cux2P70298 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cux2P70298 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC18.03■□□□□ 0.48
Cux2P70298 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 470.6 ms