Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.51□□□□□ -0.41
Tpm1P58771 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.51□□□□□ -0.41
Tpm1P58771 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Tpm1P58771 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.51□□□□□ -0.41
Tpm1P58771 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tpm1P58771 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC12.5□□□□□ -0.41
Tpm1P58771 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.5□□□□□ -0.41
Tpm1P58771 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm4310-201ENSMUST00000177847 889 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.5□□□□□ -0.41
Tpm1P58771 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tpm1P58771 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tpm1P58771 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC12.49□□□□□ -0.41
Tpm1P58771 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tpm1P58771 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tpm1P58771 Gm15207-201ENSMUST00000119259 442 ntBASIC12.49□□□□□ -0.41
Tpm1P58771 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Gm2991-201ENSMUST00000173338 480 ntBASIC12.49□□□□□ -0.41
Tpm1P58771 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tpm1P58771 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Tpm1P58771 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tpm1P58771 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Tpm1P58771 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms