Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rrp1P56183 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.65□□□□□ -0.38
Rrp1P56183 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rrp1P56183 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.65□□□□□ -0.38
Rrp1P56183 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm25881-201ENSMUST00000157783 103 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm16570-201ENSMUST00000161951 436 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Gm3150-201ENSMUST00000166418 204 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Gm37466-201ENSMUST00000195692 652 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Gm5996-201ENSMUST00000211110 718 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rrp1P56183 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rrp1P56183 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rrp1P56183 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rrp1P56183 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.65□□□□□ -0.38
Rrp1P56183 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Rrp1P56183 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.64□□□□□ -0.39
Rrp1P56183 Gm24990-201ENSMUST00000157406 323 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Rrp1P56183 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.64□□□□□ -0.39
Rrp1P56183 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Gm17825-201ENSMUST00000206836 794 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Gm45186-201ENSMUST00000206874 478 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.64□□□□□ -0.39
Rrp1P56183 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Gm10288-201ENSMUST00000084614 537 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.64□□□□□ -0.39
Rrp1P56183 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rrp1P56183 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rrp1P56183 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rrp1P56183 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rrp1P56183 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rrp1P56183 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rrp1P56183 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rrp1P56183 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.63□□□□□ -0.39
Rrp1P56183 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rrp1P56183 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp1P56183 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms