Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Gm26083-201ENSMUST00000157904 193 ntBASIC11.47□□□□□ -0.57
SftpbP50405 Olfml3-204ENSMUST00000169286 874 ntBASIC11.47□□□□□ -0.57
SftpbP50405 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.47□□□□□ -0.57
SftpbP50405 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.47□□□□□ -0.57
SftpbP50405 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.47□□□□□ -0.57
SftpbP50405 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SftpbP50405 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SftpbP50405 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SftpbP50405 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SftpbP50405 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SftpbP50405 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
SftpbP50405 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Gm12247-201ENSMUST00000117585 670 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.46□□□□□ -0.57
SftpbP50405 Gm12501-201ENSMUST00000119163 529 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Gm14208-201ENSMUST00000119645 678 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Gm13461-201ENSMUST00000120980 662 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
SftpbP50405 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
SftpbP50405 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.46□□□□□ -0.57
SftpbP50405 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
SftpbP50405 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.46□□□□□ -0.57
SftpbP50405 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SftpbP50405 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
SftpbP50405 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.46□□□□□ -0.58
SftpbP50405 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SftpbP50405 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SftpbP50405 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SftpbP50405 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
SftpbP50405 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SftpbP50405 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm8199-201ENSMUST00000121323 823 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Gm6108-201ENSMUST00000208365 367 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Gm5996-201ENSMUST00000211110 718 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Gm45856-201ENSMUST00000212752 416 ntBASIC11.45□□□□□ -0.58
SftpbP50405 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 Gm21811-201ENSMUST00000096485 930 ntBASIC11.45□□□□□ -0.58
SftpbP50405 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SftpbP50405 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.45□□□□□ -0.58
SftpbP50405 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms