Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Gm8261-201ENSMUST00000119275 1208 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm12337-201ENSMUST00000119634 400 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm12791-201ENSMUST00000120788 655 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC11.11□□□□□ -0.63
Sox18P43680 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm24809-201ENSMUST00000175318 271 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Gm37782-201ENSMUST00000194879 678 ntBASIC11.11□□□□□ -0.63
Sox18P43680 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm39288-201ENSMUST00000210554 446 ntBASIC11.11□□□□□ -0.63
Sox18P43680 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.11□□□□□ -0.63
Sox18P43680 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox18P43680 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox18P43680 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox18P43680 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Gm16459-201ENSMUST00000121443 686 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.1□□□□□ -0.63
Sox18P43680 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sox18P43680 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm35960-201ENSMUST00000202712 767 ntBASIC11.1□□□□□ -0.63
Sox18P43680 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm44830-201ENSMUST00000207667 584 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm7904-201ENSMUST00000217049 465 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox18P43680 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Sox18P43680 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.1□□□□□ -0.63
Sox18P43680 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox18P43680 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox18P43680 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms