Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm17391-201ENSMUST00000171036 126 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm23771-201ENSMUST00000178702 110 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm7467-201ENSMUST00000185173 652 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Mt1-202ENSMUST00000211807 1085 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.28□□□□□ -0.76
Nkx2-2P42586 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nkx2-2P42586 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx2-2P42586 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm9133-201ENSMUST00000118289 540 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm27910-201ENSMUST00000185004 107 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm18827-201ENSMUST00000188341 790 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm9111-201ENSMUST00000219394 709 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm10263-201ENSMUST00000085163 300 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.27□□□□□ -0.77
Nkx2-2P42586 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx2-2P42586 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 BC043934-202ENSMUST00000185694 2356 ntBASIC10.26□□□□□ -0.77
Nkx2-2P42586 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx2-2P42586 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx2-2P42586 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms