Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
VhlP40338 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
VhlP40338 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VhlP40338 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
VhlP40338 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.22□□□□□ -0.93
VhlP40338 Gm15617-201ENSMUST00000118973 771 ntBASIC9.22□□□□□ -0.93
VhlP40338 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.22□□□□□ -0.93
VhlP40338 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
VhlP40338 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
VhlP40338 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
VhlP40338 Gm6621-201ENSMUST00000193251 772 ntBASIC9.22□□□□□ -0.93
VhlP40338 Gm44364-201ENSMUST00000198368 141 ntBASIC9.22□□□□□ -0.93
VhlP40338 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.22□□□□□ -0.93
VhlP40338 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Gm9257-201ENSMUST00000221254 232 ntBASIC9.22□□□□□ -0.93
VhlP40338 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.22□□□□□ -0.93
VhlP40338 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.22□□□□□ -0.93
VhlP40338 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.22□□□□□ -0.93
VhlP40338 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.22□□□□□ -0.93
VhlP40338 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
VhlP40338 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.22□□□□□ -0.93
VhlP40338 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
VhlP40338 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VhlP40338 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
VhlP40338 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
VhlP40338 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.21□□□□□ -0.93
VhlP40338 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.21□□□□□ -0.93
VhlP40338 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.21□□□□□ -0.93
VhlP40338 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
VhlP40338 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VhlP40338 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
VhlP40338 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.21□□□□□ -0.94
VhlP40338 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.21□□□□□ -0.94
VhlP40338 Gm5616-201ENSMUST00000165252 384 ntBASIC9.21□□□□□ -0.94
VhlP40338 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
VhlP40338 Gm8741-201ENSMUST00000174736 384 ntBASIC9.21□□□□□ -0.94
VhlP40338 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
VhlP40338 Gm32111-201ENSMUST00000207689 846 ntBASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms