Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BrafP28028 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.02□□□□□ -0.65
BrafP28028 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BrafP28028 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BrafP28028 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.01□□□□□ -0.65
BrafP28028 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.01□□□□□ -0.65
BrafP28028 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.01□□□□□ -0.65
BrafP28028 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BrafP28028 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
BrafP28028 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
BrafP28028 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Gm24990-201ENSMUST00000157406 323 ntBASIC11.01□□□□□ -0.65
BrafP28028 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.01□□□□□ -0.65
BrafP28028 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.01□□□□□ -0.65
BrafP28028 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.01□□□□□ -0.65
BrafP28028 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BrafP28028 Gm5714-201ENSMUST00000197343 566 ntBASIC11.01□□□□□ -0.65
BrafP28028 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.01□□□□□ -0.65
BrafP28028 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BrafP28028 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BrafP28028 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.01□□□□□ -0.65
BrafP28028 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
BrafP28028 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11□□□□□ -0.65
BrafP28028 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11□□□□□ -0.65
BrafP28028 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
BrafP28028 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11□□□□□ -0.65
BrafP28028 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11□□□□□ -0.65
BrafP28028 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11□□□□□ -0.65
BrafP28028 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11□□□□□ -0.65
BrafP28028 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Gm16505-201ENSMUST00000179981 232 ntBASIC11□□□□□ -0.65
BrafP28028 Gm27341-201ENSMUST00000183570 106 ntBASIC11□□□□□ -0.65
BrafP28028 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
BrafP28028 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11□□□□□ -0.65
BrafP28028 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11□□□□□ -0.65
BrafP28028 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11□□□□□ -0.65
BrafP28028 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11□□□□□ -0.65
BrafP28028 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11□□□□□ -0.65
BrafP28028 Gm19208-201ENSMUST00000213861 912 ntBASIC11□□□□□ -0.65
BrafP28028 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
BrafP28028 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms