Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rb1P13405 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.62□□□□□ -0.55
Rb1P13405 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.62□□□□□ -0.55
Rb1P13405 Gm24844-201ENSMUST00000158679 127 ntBASIC11.62□□□□□ -0.55
Rb1P13405 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Gm5706-201ENSMUST00000181525 993 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.62□□□□□ -0.55
Rb1P13405 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.62□□□□□ -0.55
Rb1P13405 Gm44329-201ENSMUST00000197469 112 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.62□□□□□ -0.55
Rb1P13405 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.62□□□□□ -0.55
Rb1P13405 Gm19009-201ENSMUST00000223072 823 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rb1P13405 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rb1P13405 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.62□□□□□ -0.55
Rb1P13405 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rb1P13405 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.61□□□□□ -0.55
Rb1P13405 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.61□□□□□ -0.55
Rb1P13405 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rb1P13405 Gm12407-201ENSMUST00000180219 324 ntBASIC11.61□□□□□ -0.55
Rb1P13405 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Gm38117-201ENSMUST00000194653 939 ntBASIC11.61□□□□□ -0.55
Rb1P13405 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.61□□□□□ -0.55
Rb1P13405 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.61□□□□□ -0.55
Rb1P13405 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rb1P13405 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rb1P13405 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rb1P13405 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rb1P13405 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.61□□□□□ -0.55
Rb1P13405 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rb1P13405 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.6□□□□□ -0.55
Rb1P13405 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.6□□□□□ -0.55
Rb1P13405 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.6□□□□□ -0.55
Rb1P13405 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.6□□□□□ -0.55
Rb1P13405 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rb1P13405 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.6□□□□□ -0.55
Rb1P13405 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.6□□□□□ -0.55
Rb1P13405 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rb1P13405 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rb1P13405 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.6□□□□□ -0.55
Rb1P13405 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms