Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fv4P11370 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fv4P11370 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Gm23200-201ENSMUST00000104379 132 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Gm14028-201ENSMUST00000117434 479 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Gm9089-201ENSMUST00000122027 526 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.84□□□□□ -0.67
Fv4P11370 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.84□□□□□ -0.67
Fv4P11370 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Gm21778-201ENSMUST00000178779 471 ntBASIC10.84□□□□□ -0.67
Fv4P11370 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.84□□□□□ -0.67
Fv4P11370 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Gm2517-201ENSMUST00000215651 348 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fv4P11370 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.84□□□□□ -0.67
Fv4P11370 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fv4P11370 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.84□□□□□ -0.67
Fv4P11370 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Fv4P11370 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Fv4P11370 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.83□□□□□ -0.68
Fv4P11370 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Fv4P11370 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm15808-201ENSMUST00000119046 604 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Gm19246-201ENSMUST00000173599 255 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Gm2383-201ENSMUST00000181461 807 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Gm29067-201ENSMUST00000190821 470 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm37835-201ENSMUST00000193305 361 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.83□□□□□ -0.68
Fv4P11370 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.83□□□□□ -0.68
Fv4P11370 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Olfr584-201ENSMUST00000098210 964 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms