Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm23769-201ENSMUST00000104441 121 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm6677-201ENSMUST00000195100 441 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.49□□□□□ -0.09
Hoxc9P09633 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm10580-201ENSMUST00000097985 396 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm10582-201ENSMUST00000097987 396 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Gm10583-201ENSMUST00000097988 396 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.49□□□□□ -0.09
Hoxc9P09633 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Hoxc9P09633 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc9P09633 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc9P09633 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm33366-201ENSMUST00000195583 3827 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm8384-201ENSMUST00000190905 704 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm7238-201ENSMUST00000206467 973 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Saa-ps-201ENSMUST00000211148 320 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm6331-201ENSMUST00000217890 450 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 CT030195.2-201ENSMUST00000226074 1286 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.48□□□□□ -0.09
Hoxc9P09633 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc9P09633 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc9P09633 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc9P09633 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hoxc9P09633 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 Mir1249-201ENSMUST00000116791 98 ntBASIC14.47□□□□□ -0.09
Hoxc9P09633 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.47□□□□□ -0.09
Hoxc9P09633 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC14.47□□□□□ -0.09
Hoxc9P09633 Gm26313-201ENSMUST00000157770 308 ntBASIC14.47□□□□□ -0.09
Hoxc9P09633 Gm11942-201ENSMUST00000180255 345 ntBASIC14.47□□□□□ -0.09
Hoxc9P09633 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.47□□□□□ -0.09
Hoxc9P09633 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxc9P09633 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc9P09633 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms