Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm42937-201ENSMUST00000197360 752 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm45925-201ENSMUST00000218882 744 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm10076-201ENSMUST00000073238 384 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 AC134898.1-201ENSMUST00000223738 1836 ntBASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trem1Q9JKE2 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.02□□□□□ -0.8
Trem1Q9JKE2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trem1Q9JKE2 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm13736-201ENSMUST00000119272 253 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Mir1894-201ENSMUST00000122802 81 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm8738-201ENSMUST00000172606 329 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm5904-201ENSMUST00000210286 865 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm37039-201ENSMUST00000193733 2485 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm44189-201ENSMUST00000204387 3083 ntBASIC10.02□□□□□ -0.81
Trem1Q9JKE2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC10.02□□□□□ -0.81
Trem1Q9JKE2 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 AC123534.1-202ENSMUST00000224256 1837 ntBASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Gm12138-201ENSMUST00000122180 951 ntBASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.01□□□□□ -0.81
Trem1Q9JKE2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms