Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm45797-201ENSMUST00000212759 1921 ntBASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Smco4Q9JIS3 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm14247-201ENSMUST00000120950 237 ntBASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm27838-201ENSMUST00000184829 128 ntBASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm37922-201ENSMUST00000195596 455 ntBASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Chchd1-203ENSMUST00000224633 557 ntBASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC8.92□□□□□ -0.98
Smco4Q9JIS3 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 AC149588.2-201ENSMUST00000228182 1859 ntBASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Snord83b-201ENSMUST00000104546 94 ntBASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Smco4Q9JIS3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms