Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm25857-201ENSMUST00000082788 129 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.34□□□□□ -0.59
Trim42Q9D2H5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trim42Q9D2H5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim42Q9D2H5 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm37965-201ENSMUST00000195304 1362 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm14644-201ENSMUST00000116671 647 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm11425-201ENSMUST00000119608 498 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm22119-201ENSMUST00000175594 99 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm9396-201ENSMUST00000076703 567 ntBASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim42Q9D2H5 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim42Q9D2H5 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms