Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim13Q9CYB0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm38266-201ENSMUST00000194931 421 ntBASIC10.42□□□□□ -0.74
Trim13Q9CYB0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim13Q9CYB0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm43962-201ENSMUST00000203898 190 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Rps4l-202ENSMUST00000204242 789 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm45598-202ENSMUST00000210719 986 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms