Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm13827-201ENSMUST00000148801 372 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm18733-202ENSMUST00000174447 401 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm6098-201ENSMUST00000180234 330 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm18014-201ENSMUST00000183369 817 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm37207-201ENSMUST00000194284 296 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.93□□□□□ -0.5
Clp1Q99LI9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Clp1Q99LI9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm18010-201ENSMUST00000203553 202 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm7238-201ENSMUST00000206467 973 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Lect2-202ENSMUST00000225183 823 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm6564-201ENSMUST00000075377 619 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm10580-201ENSMUST00000097985 396 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm10582-201ENSMUST00000097987 396 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm10583-201ENSMUST00000097988 396 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Paupar-201ENSMUST00000194826 3482 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.92□□□□□ -0.5
Clp1Q99LI9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clp1Q99LI9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clp1Q99LI9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.91□□□□□ -0.5
Clp1Q99LI9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clp1Q99LI9 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clp1Q99LI9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clp1Q99LI9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clp1Q99LI9 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms