Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm38314-201ENSMUST00000195709 625 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm5982-201ENSMUST00000196234 512 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm43378-201ENSMUST00000199336 582 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm45113-201ENSMUST00000207518 165 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Usp11Q99K46 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.87□□□□□ -0.51
Usp11Q99K46 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp11Q99K46 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Usp11Q99K46 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm15595-201ENSMUST00000120840 961 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm23699-201ENSMUST00000158835 135 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm19353-201ENSMUST00000184561 445 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.86□□□□□ -0.51
Usp11Q99K46 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp11Q99K46 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Usp11Q99K46 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.86□□□□□ -0.51
Usp11Q99K46 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Usp11Q99K46 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Usp11Q99K46 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms