Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.14□□□□□ -0.47
TraipQ8VIG6 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TraipQ8VIG6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Btrc-209ENSMUST00000224478 2194 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm5834-201ENSMUST00000126680 1026 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm9081-201ENSMUST00000182346 991 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm45120-201ENSMUST00000208880 408 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Cog3-203ENSMUST00000227473 4197 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.13□□□□□ -0.47
TraipQ8VIG6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TraipQ8VIG6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm44441-201ENSMUST00000203642 2475 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Mir453-201ENSMUST00000104732 82 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm16420-201ENSMUST00000120258 856 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Mir1905-201ENSMUST00000122779 82 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm19587-201ENSMUST00000191395 545 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm43671-201ENSMUST00000200422 433 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm43377-201ENSMUST00000201640 455 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm7082-201ENSMUST00000209880 969 ntBASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TraipQ8VIG6 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TraipQ8VIG6 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms