Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm8956-201ENSMUST00000203939 825 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm44651-201ENSMUST00000207343 372 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh18Q8VHR0 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdh18Q8VHR0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.9□□□□□ -0.67
Pcdh18Q8VHR0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdh18Q8VHR0 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdh18Q8VHR0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm8885-201ENSMUST00000189382 598 ntBASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh18Q8VHR0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Gm14723-201ENSMUST00000118686 215 ntBASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Gm14381-201ENSMUST00000122105 414 ntBASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh18Q8VHR0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms