Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15258-201ENSMUST00000153801 741 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm4960-201ENSMUST00000182928 1001 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm18555-201ENSMUST00000197935 584 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 AC132384.2-201ENSMUST00000218018 526 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm10238-201ENSMUST00000089689 408 ntBASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ddx54Q8K4L0 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gm8725-201ENSMUST00000221829 1333 ntBASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Mir598-201ENSMUST00000102094 79 ntBASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gm23432-201ENSMUST00000157181 131 ntBASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ddx54Q8K4L0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ddx54Q8K4L0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm37597-201ENSMUST00000191853 382 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm3527-201ENSMUST00000198905 460 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm8268-201ENSMUST00000209683 458 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm45745-201ENSMUST00000211447 1180 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm7242-201ENSMUST00000221134 705 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms