Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm9230-201ENSMUST00000188228 532 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm5455-201ENSMUST00000058710 715 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm12390-201ENSMUST00000117897 397 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm7150-201ENSMUST00000122032 981 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ebf4Q8K4J2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ebf4Q8K4J2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms