Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28aQ8CEI3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc28aQ8CEI3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ccdc28aQ8CEI3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Ccdc28aQ8CEI3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc28aQ8CEI3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm23949-201ENSMUST00000104027 127 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm14724-201ENSMUST00000118400 537 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm24074-201ENSMUST00000158178 260 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm16505-201ENSMUST00000179981 232 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm37666-201ENSMUST00000194110 866 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm45433-201ENSMUST00000209386 247 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc28aQ8CEI3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Mir1896-201ENSMUST00000122641 81 ntBASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc28aQ8CEI3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms