Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm12736-201ENSMUST00000119330 236 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm11540-201ENSMUST00000117457 780 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm12435-201ENSMUST00000118949 1016 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm14633-201ENSMUST00000121152 470 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm13505-201ENSMUST00000121666 817 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm20091-201ENSMUST00000179683 189 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm43117-201ENSMUST00000198531 379 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 AC132384.2-201ENSMUST00000218018 526 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 AC134860.2-201ENSMUST00000225277 1036 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 AC141884.2-201ENSMUST00000228811 775 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm8618-201ENSMUST00000097570 432 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col16a1Q8BLX7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm13688-201ENSMUST00000121557 608 ntBASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm13857-201ENSMUST00000139645 173 ntBASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm42687-201ENSMUST00000199075 164 ntBASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Gm44663-201ENSMUST00000206898 3150 ntBASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col16a1Q8BLX7 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms