Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm7584-201ENSMUST00000175829 940 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm9353-201ENSMUST00000200472 604 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm6867-201ENSMUST00000219165 425 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2bQ8BJF9 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2bQ8BJF9 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm13350-201ENSMUST00000120519 479 ntBASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm8459-201ENSMUST00000162504 760 ntBASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2bQ8BJF9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2bQ8BJF9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms