Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm26286-201ENSMUST00000104166 134 ntBASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm12266-201ENSMUST00000120311 962 ntBASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Mir8093-201ENSMUST00000185043 137 ntBASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ctdp1Q7TSG2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm14208-201ENSMUST00000119645 678 ntBASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm28071-201ENSMUST00000190355 478 ntBASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm37666-201ENSMUST00000194110 866 ntBASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ctdp1Q7TSG2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ctdp1Q7TSG2 Gm17040-202ENSMUST00000170597 889 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms