Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Mir1249-201ENSMUST00000116791 98 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm13171-201ENSMUST00000117233 391 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm24943-201ENSMUST00000158329 433 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm20493-201ENSMUST00000173706 213 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm44640-201ENSMUST00000206894 247 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm6518-201ENSMUST00000208450 342 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx55Q6ZPL9 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm12947-201ENSMUST00000116114 420 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm25288-201ENSMUST00000122800 265 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm44498-201ENSMUST00000199509 111 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx55Q6ZPL9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms