Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44640-201ENSMUST00000206894 247 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm6425-201ENSMUST00000136332 790 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm5801-201ENSMUST00000182247 780 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm8384-201ENSMUST00000190905 704 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm43097-201ENSMUST00000196867 151 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm25514-201ENSMUST00000083860 135 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Nup98Q6PFD9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm8019-201ENSMUST00000119317 587 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm9625-201ENSMUST00000180422 955 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm8557-201ENSMUST00000220777 475 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm24074-201ENSMUST00000158178 260 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup98Q6PFD9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms