Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.17□□□□□ -0.46
Foxd4Q60688 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.17□□□□□ -0.46
Foxd4Q60688 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Foxd4Q60688 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Foxd4Q60688 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxd4Q60688 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxd4Q60688 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxd4Q60688 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxd4Q60688 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxd4Q60688 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm12731-201ENSMUST00000120932 268 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm15227-201ENSMUST00000121844 399 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.16□□□□□ -0.46
Foxd4Q60688 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm20482-202ENSMUST00000174729 825 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxd4Q60688 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.16□□□□□ -0.46
Foxd4Q60688 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxd4Q60688 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Serpini2-201ENSMUST00000039047 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Mup-ps10-201ENSMUST00000119626 556 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm43743-201ENSMUST00000197898 697 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm21769-201ENSMUST00000211922 111 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxd4Q60688 AC154843.1-201ENSMUST00000226897 1138 ntBASIC12.15□□□□□ -0.46
Foxd4Q60688 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Foxd4Q60688 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxd4Q60688 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms