Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm11942-201ENSMUST00000180255 345 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm29067-201ENSMUST00000190821 470 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm42660-201ENSMUST00000197733 947 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm45527-201ENSMUST00000211052 774 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx49Q4FZF3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm13204-201ENSMUST00000120110 821 ntBASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm23675-201ENSMUST00000157311 125 ntBASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm45094-201ENSMUST00000207013 617 ntBASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm2448-201ENSMUST00000207080 559 ntBASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx49Q4FZF3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx49Q4FZF3 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms