Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11954-201ENSMUST00000121403 349 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 1700019N19Rik-202ENSMUST00000166692 983 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm44306-201ENSMUST00000203058 203 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm44139-201ENSMUST00000204903 373 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm15224-201ENSMUST00000120501 388 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm29175-201ENSMUST00000189500 402 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm4178-201ENSMUST00000218307 649 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AC154640.1-204ENSMUST00000227105 648 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm6157-201ENSMUST00000199935 1897 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AC241621.2-201ENSMUST00000223991 2151 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm37122-201ENSMUST00000195313 1567 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm25561-201ENSMUST00000104607 125 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm23021-201ENSMUST00000158765 169 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm8893-201ENSMUST00000172146 1242 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm5710-201ENSMUST00000183020 995 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm17813-201ENSMUST00000185377 328 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm8976-201ENSMUST00000187136 703 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm38320-201ENSMUST00000192767 1281 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AC134860.5-201ENSMUST00000225071 1249 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ush2AQ2QI47 AC116503.1-201ENSMUST00000215445 2192 ntBASIC5.72□□□□□ -1.49
Ush2AQ2QI47 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Ccnb1ip1-201ENSMUST00000095932 1509 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Lgals8-206ENSMUST00000135166 2416 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm20554-201ENSMUST00000177421 2352 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm7571-201ENSMUST00000120252 927 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm11888-201ENSMUST00000120471 810 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm24298-201ENSMUST00000158299 60 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm18822-201ENSMUST00000182857 1025 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm8143-201ENSMUST00000203654 1186 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm2694-209ENSMUST00000210935 1125 ntTSL 5 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm23973-201ENSMUST00000083320 321 ntBASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ush2AQ2QI47 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 AC151903.1-201ENSMUST00000226677 1423 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Mir291b-201ENSMUST00000104838 79 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms