Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Shox2P70390 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.07□□□□□ -0.64
Shox2P70390 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm43633-201ENSMUST00000202455 2330 ntBASIC11.07□□□□□ -0.64
Shox2P70390 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
Shox2P70390 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shox2P70390 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shox2P70390 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.07□□□□□ -0.64
Shox2P70390 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Shox2P70390 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gm10434-201ENSMUST00000101158 471 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Shox2P70390 Snord17-201ENSMUST00000104526 238 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.06□□□□□ -0.64
Shox2P70390 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Mir6977-201ENSMUST00000184960 64 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gm37424-201ENSMUST00000191727 561 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gm43118-201ENSMUST00000199149 775 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gm43818-201ENSMUST00000200605 466 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.06□□□□□ -0.64
Shox2P70390 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.06□□□□□ -0.64
Shox2P70390 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.06□□□□□ -0.64
Shox2P70390 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Shox2P70390 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shox2P70390 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Shox2P70390 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC11.05□□□□□ -0.64
Shox2P70390 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Gm11531-201ENSMUST00000117614 555 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.05□□□□□ -0.64
Shox2P70390 Gm25661-201ENSMUST00000157704 296 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Olfml3-204ENSMUST00000169286 874 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Gm9002-201ENSMUST00000178437 499 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Gm19187-201ENSMUST00000206781 892 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Shox2P70390 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.05□□□□□ -0.64
Shox2P70390 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Shox2P70390 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shox2P70390 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC11.05□□□□□ -0.64
Shox2P70390 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms