Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.08□□□□□ -0.96
Lmo4P61969 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Lmo4P61969 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.08□□□□□ -0.96
Lmo4P61969 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.08□□□□□ -0.96
Lmo4P61969 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Lmo4P61969 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Lmo4P61969 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Lmo4P61969 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Lmo4P61969 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm23612-201ENSMUST00000103823 110 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.07□□□□□ -0.96
Lmo4P61969 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm24328-201ENSMUST00000175104 67 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Gm26272-201ENSMUST00000179241 132 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Gm23576-201ENSMUST00000179918 110 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.07□□□□□ -0.96
Lmo4P61969 Mir8091-201ENSMUST00000183602 139 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Mir6941-201ENSMUST00000184711 59 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Gm20781-201ENSMUST00000193154 693 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Gm21736-201ENSMUST00000195399 693 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Gm8420-201ENSMUST00000097103 598 ntBASIC9.07□□□□□ -0.96
Lmo4P61969 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.07□□□□□ -0.96
Lmo4P61969 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Lmo4P61969 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms