Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm43962-201ENSMUST00000203898 190 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm44967-201ENSMUST00000207047 631 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm9519-201ENSMUST00000206108 1337 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sf3b6P59708 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sf3b6P59708 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.01□□□□□ -0.81
Sf3b6P59708 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sf3b6P59708 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10□□□□□ -0.81
Sf3b6P59708 Gm43221-201ENSMUST00000197612 2071 ntBASIC10□□□□□ -0.81
Sf3b6P59708 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Gm26684-202ENSMUST00000228229 8257 ntBASIC10□□□□□ -0.81
Sf3b6P59708 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Sf3b6P59708 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Sf3b6P59708 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Sf3b6P59708 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10□□□□□ -0.81
Sf3b6P59708 Gm12749-201ENSMUST00000122138 1159 ntBASIC10□□□□□ -0.81
Sf3b6P59708 Gm13366-201ENSMUST00000122198 970 ntBASIC10□□□□□ -0.81
Sf3b6P59708 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Sf3b6P59708 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms