Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.53□□□□□ -0.4
Tpm1P58771 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.53□□□□□ -0.4
Tpm1P58771 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.53□□□□□ -0.4
Tpm1P58771 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.53□□□□□ -0.4
Tpm1P58771 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Tpm1P58771 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tpm1P58771 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tpm1P58771 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.52□□□□□ -0.4
Tpm1P58771 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Tpm1P58771 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 Gm37424-201ENSMUST00000191727 561 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.52□□□□□ -0.41
Tpm1P58771 Gm9823-201ENSMUST00000051212 327 ntBASIC12.52□□□□□ -0.41
Tpm1P58771 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tpm1P58771 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tpm1P58771 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tpm1P58771 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Tpm1P58771 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.52□□□□□ -0.41
Tpm1P58771 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tpm1P58771 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tpm1P58771 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Tpm1P58771 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.51□□□□□ -0.41
Tpm1P58771 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Gm8343-201ENSMUST00000182705 994 ntBASIC12.51□□□□□ -0.41
Tpm1P58771 Gm27572-201ENSMUST00000183702 255 ntBASIC12.51□□□□□ -0.41
Tpm1P58771 Gm43184-201ENSMUST00000197247 542 ntBASIC12.51□□□□□ -0.41
Tpm1P58771 Gm17827-201ENSMUST00000211825 742 ntBASIC12.51□□□□□ -0.41
Tpm1P58771 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.51□□□□□ -0.41
Tpm1P58771 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.51□□□□□ -0.41
Tpm1P58771 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tpm1P58771 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tpm1P58771 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms