Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.15□□□□□ -0.62
Krt6aP50446 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm13916-201ENSMUST00000117368 628 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Gm11573-201ENSMUST00000119956 394 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm25881-201ENSMUST00000157783 103 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm17376-201ENSMUST00000166016 84 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm8100-201ENSMUST00000182906 988 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Krt6aP50446 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.15□□□□□ -0.62
Krt6aP50446 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Gm10288-201ENSMUST00000084614 537 ntBASIC11.15□□□□□ -0.62
Krt6aP50446 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt6aP50446 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt6aP50446 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Krt6aP50446 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt6aP50446 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Krt6aP50446 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Krt6aP50446 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.15□□□□□ -0.63
Krt6aP50446 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt6aP50446 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.14□□□□□ -0.63
Krt6aP50446 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Krt6aP50446 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Gm12247-201ENSMUST00000117585 670 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.14□□□□□ -0.63
Krt6aP50446 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.14□□□□□ -0.63
Krt6aP50446 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.14□□□□□ -0.63
Krt6aP50446 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 Gm7003-201ENSMUST00000195089 312 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Gm6082-201ENSMUST00000215204 454 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.14□□□□□ -0.63
Krt6aP50446 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.14□□□□□ -0.63
Krt6aP50446 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt6aP50446 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Krt6aP50446 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Krt6aP50446 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Krt6aP50446 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.13□□□□□ -0.63
Krt6aP50446 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Krt6aP50446 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Krt6aP50446 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms