Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm12196-201ENSMUST00000120954 262 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Gli1P47806 Gm36991-201ENSMUST00000191800 648 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.01□□□□□ -0.65
Gli1P47806 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.01□□□□□ -0.65
Gli1P47806 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Gm6439-201ENSMUST00000199849 862 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Gm6905-201ENSMUST00000205729 511 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.01□□□□□ -0.65
Gli1P47806 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Gli1P47806 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11□□□□□ -0.65
Gli1P47806 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gli1P47806 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Gm7851-201ENSMUST00000117574 323 ntBASIC11□□□□□ -0.65
Gli1P47806 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11□□□□□ -0.65
Gli1P47806 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11□□□□□ -0.65
Gli1P47806 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11□□□□□ -0.65
Gli1P47806 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Gli1P47806 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11□□□□□ -0.65
Gli1P47806 Gm42682-201ENSMUST00000198349 1265 ntBASIC11□□□□□ -0.65
Gli1P47806 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11□□□□□ -0.65
Gli1P47806 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Gm270-201ENSMUST00000223010 976 ntBASIC11□□□□□ -0.65
Gli1P47806 CT009713.8-202ENSMUST00000224732 385 ntBASIC11□□□□□ -0.65
Gli1P47806 CT009713.8-201ENSMUST00000225448 560 ntBASIC11□□□□□ -0.65
Gli1P47806 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Gm5455-201ENSMUST00000058710 715 ntBASIC11□□□□□ -0.65
Gli1P47806 Ginm1-202ENSMUST00000065124 300 ntBASIC11□□□□□ -0.65
Gli1P47806 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gli1P47806 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gli1P47806 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Gm9544-201ENSMUST00000223349 2482 ntBASIC11□□□□□ -0.65
Gli1P47806 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11□□□□□ -0.65
Gli1P47806 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11□□□□□ -0.65
Gli1P47806 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gli1P47806 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11□□□□□ -0.65
Gli1P47806 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gli1P47806 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11□□□□□ -0.65
Gli1P47806 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.99□□□□□ -0.65
Gli1P47806 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gli1P47806 Gm23596-201ENSMUST00000104304 132 ntBASIC10.99□□□□□ -0.65
Gli1P47806 Gm24891-201ENSMUST00000104391 136 ntBASIC10.99□□□□□ -0.65
Gli1P47806 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.99□□□□□ -0.65
Gli1P47806 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.99□□□□□ -0.65
Gli1P47806 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.99□□□□□ -0.65
Gli1P47806 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.99□□□□□ -0.65
Gli1P47806 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gli1P47806 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.99□□□□□ -0.65
Gli1P47806 Mir6546-201ENSMUST00000184460 62 ntBASIC10.99□□□□□ -0.65
Gli1P47806 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.99□□□□□ -0.65
Gli1P47806 Gm4482-201ENSMUST00000200876 742 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms